| Registro completo |
| Provedor de dados: |
ArchiMer
|
| País: |
France
|
| Título: |
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
|
| Autores: |
Seeleuthner, Yoann
Mondy, Samuel
Lombard, Vincent
Carradec, Quentin
Pelletier, Eric
Wessner, Marc
Leconte, Jade
Mangot, Jean-francois
Poulain, Julie
Labadie, Karine
Logares, Ramiro
Sunagawa, Shinichi
De Berardinis, Veronique
Salanoubat, Marcel
Dimier, Celine
Kandels-lewis, Stefanie
Picheral, Marc
Searson, Sarah
Pesant, Stephane
Poulton, Nicole
Stepanauskas, Ramunas
Bork, Peer
Bowler, Chris
Hingamp, Pascal
Sullivan, Matthew B.
Iudicone, Daniele
Massana, Ramon
Aury, Jean-marc
Henrissat, Bernard
Karsenti, Eric
Jaillon, Olivier
Sieracki, Mike
De Vargas, Colomban
Wincker, Patrick
Tara Oceans Coordinators,
|
| Data: |
2018-01
|
| Ano: |
2018
|
| Resumo: |
Single-celled eukaryotes (protists) are critical players in global biogeochemical cycling of nutrients and energy in the oceans. While their roles as primary producers and grazers are well appreciated, other aspects of their life histories remain obscure due to challenges in culturing and sequencing their natural diversity. Here, we exploit single-cell genomics and metagenomics data from the circumglobal Tara Oceans expedition to analyze the genome content and apparent oceanic distribution of seven prevalent lineages of uncultured heterotrophic stramenopiles. Based on the available data, each sequenced genome or genotype appears to have a specific oceanic distribution, principally correlated with water temperature and depth. The genome content provides hypotheses for specialization in terms of cell motility, food spectra, and trophic stages, including the potential impact on their lifestyles of horizontal gene transfer from prokaryotes. Our results support the idea that prominent heterotrophic marine protists perform diverse functions in ocean ecology.
|
| Tipo: |
Text
|
| Idioma: |
Inglês
|
| Identificador: |
https://archimer.ifremer.fr/doc/00660/77234/79044.pdf
https://archimer.ifremer.fr/doc/00660/77234/79045.pdf
https://archimer.ifremer.fr/doc/00660/77234/79046.pdf
https://archimer.ifremer.fr/doc/00660/77234/79047.pdf
https://archimer.ifremer.fr/doc/00660/77234/79048.xlsx
https://archimer.ifremer.fr/doc/00660/77234/79049.xlsx
https://archimer.ifremer.fr/doc/00660/77234/79050.xlsx
https://archimer.ifremer.fr/doc/00660/77234/79052.pdf
DOI:10.1038/s41467-017-02235-3
https://archimer.ifremer.fr/doc/00660/77234/
|
| Editor: |
Nature Publishing Group
|
| Relação: |
info:eu-repo/grantAgreement/EC/FP7/287589/EU//MICRO B3
|
| Formato: |
application/pdf
|
| Fonte: |
Nature Communications (2041-1723) (Nature Publishing Group), 2018-01 , Vol. 9 , N. 310 , P. 10p.
|
| Direitos: |
info:eu-repo/semantics/openAccess
restricted use
|
|
